I've noticed this only with the latest version. I have it set up to automatically connect to a bookmark on startup, and it does that fine. But I have quite a few bookmarks that are to different folders on the same FTP server, and when I try to connect to one of those, it won't change to the new location. In order to get to the new location, I have to connect to a bookmark on a completely different server, and then back to the folder I want to be at on the first server. Again, this only appeared in the latest update. Before I could switch between any of my bookmarks without any problems.