When I use synchronize to upload changes throughout my directory structure, I get "Transfer incomplete". When I Resume or Reload, I get the same thing, with less that was to be uploaded. For example, just now the first try gave me 9.5K of 9.6K uploaded and the second try gave me 0 B of 102 B uploaded.

I do have hidden files in the directory structure, and I have several levels of subdirectories.

If I expand all directories at the prompt after issuing the Synchronize command and then click Continue, it works without error.

When I try the synchronize without expanding (which seems to always produce the error mentioned above), and then synchronize again with expanding, there appears to be nothing to upload.

As this is a critical web application, I would rather not assume the synchronize completed when I see an error like that. But it is a pain to have to expand the directory structure every time I synchronize.

This happens over SFTP (I don't know about the other protocols).